CDS

Accession Number TCMCG017C31854
gbkey CDS
Protein Id OMO58449.1
Location complement(3055..3786)
GeneID InterPro:IPR001841
Organism Corchorus olitorius
locus_tag COLO4_34614

Protein

Length 243aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA215141, BioSample:SAMN03160584
db_source AWUE01022416.1
Definition Zinc finger, RING-type [Corchorus olitorius]
Locus_tag COLO4_34614

EGGNOG-MAPPER Annotation

COG_category O
Description ubiquitin-protein transferase activity
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
ko04121        [VIEW IN KEGG]
ko04131        [VIEW IN KEGG]
KEGG_ko ko:K11982        [VIEW IN KEGG]
ko:K22378        [VIEW IN KEGG]
EC 2.3.2.27        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway -
GOs GO:0000151        [VIEW IN EMBL-EBI]
GO:0000153        [VIEW IN EMBL-EBI]
GO:0000209        [VIEW IN EMBL-EBI]
GO:0000835        [VIEW IN EMBL-EBI]
GO:0000836        [VIEW IN EMBL-EBI]
GO:0002020        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0004842        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005515        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0005783        [VIEW IN EMBL-EBI]
GO:0005789        [VIEW IN EMBL-EBI]
GO:0006464        [VIEW IN EMBL-EBI]
GO:0006508        [VIEW IN EMBL-EBI]
GO:0006511        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0006950        [VIEW IN EMBL-EBI]
GO:0006986        [VIEW IN EMBL-EBI]
GO:0007154        [VIEW IN EMBL-EBI]
GO:0007165        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0008593        [VIEW IN EMBL-EBI]
GO:0009056        [VIEW IN EMBL-EBI]
GO:0009057        [VIEW IN EMBL-EBI]
GO:0009966        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010033        [VIEW IN EMBL-EBI]
GO:0010243        [VIEW IN EMBL-EBI]
GO:0010468        [VIEW IN EMBL-EBI]
GO:0010498        [VIEW IN EMBL-EBI]
GO:0010646        [VIEW IN EMBL-EBI]
GO:0012505        [VIEW IN EMBL-EBI]
GO:0016020        [VIEW IN EMBL-EBI]
GO:0016567        [VIEW IN EMBL-EBI]
GO:0016740        [VIEW IN EMBL-EBI]
GO:0019222        [VIEW IN EMBL-EBI]
GO:0019538        [VIEW IN EMBL-EBI]
GO:0019787        [VIEW IN EMBL-EBI]
GO:0019899        [VIEW IN EMBL-EBI]
GO:0019941        [VIEW IN EMBL-EBI]
GO:0023051        [VIEW IN EMBL-EBI]
GO:0023052        [VIEW IN EMBL-EBI]
GO:0030163        [VIEW IN EMBL-EBI]
GO:0030433        [VIEW IN EMBL-EBI]
GO:0030968        [VIEW IN EMBL-EBI]
GO:0031984        [VIEW IN EMBL-EBI]
GO:0032446        [VIEW IN EMBL-EBI]
GO:0032501        [VIEW IN EMBL-EBI]
GO:0032502        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0033554        [VIEW IN EMBL-EBI]
GO:0034620        [VIEW IN EMBL-EBI]
GO:0034976        [VIEW IN EMBL-EBI]
GO:0035264        [VIEW IN EMBL-EBI]
GO:0035966        [VIEW IN EMBL-EBI]
GO:0035967        [VIEW IN EMBL-EBI]
GO:0036211        [VIEW IN EMBL-EBI]
GO:0036503        [VIEW IN EMBL-EBI]
GO:0036513        [VIEW IN EMBL-EBI]
GO:0040007        [VIEW IN EMBL-EBI]
GO:0042175        [VIEW IN EMBL-EBI]
GO:0042221        [VIEW IN EMBL-EBI]
GO:0043161        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043412        [VIEW IN EMBL-EBI]
GO:0043632        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044248        [VIEW IN EMBL-EBI]
GO:0044257        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044265        [VIEW IN EMBL-EBI]
GO:0044267        [VIEW IN EMBL-EBI]
GO:0044322        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044425        [VIEW IN EMBL-EBI]
GO:0044432        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0048583        [VIEW IN EMBL-EBI]
GO:0048589        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0050794        [VIEW IN EMBL-EBI]
GO:0050896        [VIEW IN EMBL-EBI]
GO:0051082        [VIEW IN EMBL-EBI]
GO:0051603        [VIEW IN EMBL-EBI]
GO:0051716        [VIEW IN EMBL-EBI]
GO:0060255        [VIEW IN EMBL-EBI]
GO:0061630        [VIEW IN EMBL-EBI]
GO:0061659        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0070647        [VIEW IN EMBL-EBI]
GO:0070887        [VIEW IN EMBL-EBI]
GO:0071310        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0098796        [VIEW IN EMBL-EBI]
GO:0098827        [VIEW IN EMBL-EBI]
GO:0140096        [VIEW IN EMBL-EBI]
GO:1901564        [VIEW IN EMBL-EBI]
GO:1901565        [VIEW IN EMBL-EBI]
GO:1901575        [VIEW IN EMBL-EBI]
GO:1901698        [VIEW IN EMBL-EBI]
GO:1902494        [VIEW IN EMBL-EBI]
GO:1990234        [VIEW IN EMBL-EBI]
GO:1990381        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGCTGCAACCAACAACGAAGGCTTCTCTCGTGTTTTGAAGATTGACATGACGGAAGTCCAGAAATCATCATCGACGTCCATTACTGATCTTTCTAAGTTTGAAATCGAGGTTCATGCCACGTTCATTATCATGCAGAAATATGGCGGCGTTGAAGATGACATGTTTGCCGAGGAGGGGAGGTTTTATTCTCAAGTAATGTATGAGTTTTCTCGGGAATATTTGATTGGCGGTGGCTACGGCGCCGTTTTAAACATGCTCAAGTCCCAGCTGCGTGTCCCCATTGAACCAGCCATCGTGGAAAAACTTGCCGCCCAGGCGGTTACCTTGGCGACAACTTCGCCAGACGGAGGCGACTGTGTTTCGGGAATGAAGGTGGAGATCGTGGCTGTTGTCAGTAGTTTGCCTGACTTTACGAATAACGATGACGACAGTGACGTTGATGATGAAGAGGATGAAGGGACGGAGGAGGAGGAGGAGGAGGACATGGACGTTGATGCTGAAGAGGATGAAGGGCTCATGACGGCGGAGGAGGTGGCGGAGAAAGTTGGGAACGTGGTTGTAGAGGCGTCCGGGAAGGATTGTTCAATTTGTTTAGGAGAGTTAACGGTGGGTTCCGAAGCCGCATGCATGCCTTGCTCTCATGTGTTTCATCGTCCGTGTATTCTAACTTGGTTGAACAGGGTTAAACGTTGCCCTTATTGTCGTTTTGATATGAATTTAACAGTATGA
Protein:  
MAATNNEGFSRVLKIDMTEVQKSSSTSITDLSKFEIEVHATFIIMQKYGGVEDDMFAEEGRFYSQVMYEFSREYLIGGGYGAVLNMLKSQLRVPIEPAIVEKLAAQAVTLATTSPDGGDCVSGMKVEIVAVVSSLPDFTNNDDDSDVDDEEDEGTEEEEEEDMDVDAEEDEGLMTAEEVAEKVGNVVVEASGKDCSICLGELTVGSEAACMPCSHVFHRPCILTWLNRVKRCPYCRFDMNLTV